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Graph Diffusion Transformer for Multi-Conditional Molecular Generation Graph Diffusion Transformer for Multi-Conditional Molecular Generation
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## Initial Setup
Please download NASBench201 dataset(NAS-Bench-201-v1_1-096897.pth) from
https://drive.google.com/file/d/16Y0UwGisiouVRxW-W5hEtbxmcHw_0hF_/view
and put it in the `/path/to/repo/graph_dit` folder.
## Running the code
start command:
``` bash
python main.py --config-name=config.yaml \
model.ensure_connected=True \
dataset.task_name='nasbench201' \
dataset.guidance_target='regression'
```
This repository contains the code for the paper "Inverse Molecular Design with Multi-Conditional Diffusion Guidance" by Gang Liu, Jiaxin Xu, Tengfei Luo, and Meng Jiang.
Paper: https://arxiv.org/abs/2401.13858 Paper: https://arxiv.org/abs/2401.13858
This is the code for Graph DiT. The denoising model architecture in `graph_dit/models` looks like: <!-- This is the code for Graph DiT. The denoising model architecture in `graph_dit/models` looks like:
<div style="display: flex;" markdown="1"> <div style="display: flex;" markdown="1">
<img src="asset/reverse.png" style="width: 45%;" alt="Description of the first image"> <img src="asset/reverse.png" style="width: 45%;" alt="Description of the first image">
<img src="asset/arch.png" style="width: 45%;" alt="Description of the second image"> <img src="asset/arch.png" style="width: 45%;" alt="Description of the second image">
</div> </div> -->
## Requirements ## Requirements