diff --git a/environment.yaml b/environment.yaml new file mode 100644 index 0000000..1b9f88e --- /dev/null +++ b/environment.yaml @@ -0,0 +1,228 @@ +name: graphdit +channels: + - pytorch + - conda-forge + - defaults +dependencies: + - _libgcc_mutex=0.1=conda_forge + - _openmp_mutex=4.5=2_gnu + - asttokens=2.4.1=pyhd8ed1ab_0 + - blas=1.0=mkl + - brotli-python=1.0.9=py39h6a678d5_8 + - bzip2=1.0.8=h5eee18b_6 + - ca-certificates=2024.7.2=h06a4308_0 + - comm=0.2.2=pyhd8ed1ab_0 + - debugpy=1.6.7=py39h6a678d5_0 + - decorator=5.1.1=pyhd8ed1ab_0 + - exceptiongroup=1.2.0=pyhd8ed1ab_2 + - executing=2.0.1=pyhd8ed1ab_0 + - ffmpeg=4.3=hf484d3e_0 + - freetype=2.12.1=h4a9f257_0 + - gmp=6.2.1=h295c915_3 + - gmpy2=2.1.2=py39heeb90bb_0 + - gnutls=3.6.15=he1e5248_0 + - idna=3.7=py39h06a4308_0 + - importlib-metadata=7.1.0=pyha770c72_0 + - importlib_metadata=7.1.0=hd8ed1ab_0 + - intel-openmp=2023.1.0=hdb19cb5_46306 + - ipykernel=6.29.4=pyh3099207_0 + - ipython=8.18.1=pyh707e725_3 + - jedi=0.19.1=pyhd8ed1ab_0 + - jinja2=3.1.4=py39h06a4308_0 + - jpeg=9e=h5eee18b_1 + - jupyter_client=8.6.2=pyhd8ed1ab_0 + - jupyter_core=5.7.2=py39hf3d152e_0 + - lame=3.100=h7b6447c_0 + - lcms2=2.12=h3be6417_0 + - ld_impl_linux-64=2.38=h1181459_1 + - lerc=3.0=h295c915_0 + - libdeflate=1.17=h5eee18b_1 + - libffi=3.4.4=h6a678d5_1 + - libgcc-ng=13.2.0=h77fa898_7 + - libgomp=13.2.0=h77fa898_7 + - libiconv=1.16=h5eee18b_3 + - libidn2=2.3.4=h5eee18b_0 + - libpng=1.6.39=h5eee18b_0 + - libsodium=1.0.18=h36c2ea0_1 + - libstdcxx-ng=11.2.0=h1234567_1 + - libtasn1=4.19.0=h5eee18b_0 + - libtiff=4.5.1=h6a678d5_0 + - libunistring=0.9.10=h27cfd23_0 + - libwebp-base=1.3.2=h5eee18b_0 + - lz4-c=1.9.4=h6a678d5_1 + - matplotlib-inline=0.1.7=pyhd8ed1ab_0 + - mkl=2023.1.0=h213fc3f_46344 + - mkl-service=2.4.0=py39h5eee18b_1 + - mkl_fft=1.3.8=py39h5eee18b_0 + - mkl_random=1.2.4=py39hdb19cb5_0 + - mpc=1.1.0=h10f8cd9_1 + - mpfr=4.0.2=hb69a4c5_1 + - mpmath=1.3.0=py39h06a4308_0 + - ncurses=6.4=h6a678d5_0 + - nest-asyncio=1.6.0=pyhd8ed1ab_0 + - nettle=3.7.3=hbbd107a_1 + - numpy-base=1.26.4=py39hb5e798b_0 + - openh264=2.1.1=h4ff587b_0 + - openjpeg=2.4.0=h9ca470c_2 + - openssl=3.3.1=h4ab18f5_0 + - packaging=24.0=pyhd8ed1ab_0 + - parso=0.8.4=pyhd8ed1ab_0 + - pexpect=4.9.0=pyhd8ed1ab_0 + - pickleshare=0.7.5=py_1003 + - pip=24.0=py39h06a4308_0 + - platformdirs=4.2.2=pyhd8ed1ab_0 + - prompt-toolkit=3.0.46=pyha770c72_0 + - psutil=5.9.8=py39hd1e30aa_0 + - ptyprocess=0.7.0=pyhd3deb0d_0 + - pure_eval=0.2.2=pyhd8ed1ab_0 + - pygments=2.18.0=pyhd8ed1ab_0 + - pysocks=1.7.1=py39h06a4308_0 + - python=3.9.19=h955ad1f_1 + - python_abi=3.9=2_cp39 + - pytorch-mutex=1.0=cpu + - pyzmq=25.1.2=py39h6a678d5_0 + - readline=8.2=h5eee18b_0 + - setuptools=69.5.1=py39h06a4308_0 + - six=1.16.0=pyh6c4a22f_0 + - sqlite=3.45.3=h5eee18b_0 + - stack_data=0.6.2=pyhd8ed1ab_0 + - sympy=1.12=py39h06a4308_0 + - tbb=2021.8.0=hdb19cb5_0 + - tk=8.6.14=h39e8969_0 + - tornado=6.4.1=py39hd3abc70_0 + - traitlets=5.14.3=pyhd8ed1ab_0 + - typing_extensions=4.12.2=pyha770c72_0 + - wcwidth=0.2.13=pyhd8ed1ab_0 + - wheel=0.43.0=py39h06a4308_0 + - xz=5.4.6=h5eee18b_1 + - zeromq=4.3.5=h6a678d5_0 + - zlib=1.2.13=h5eee18b_1 + - zstd=1.5.5=hc292b87_2 + - pip: + - absl-py==2.1.0 + - accelerate==0.34.2 + - aiohttp==3.9.5 + - aiosignal==1.3.1 + - antlr4-python3-runtime==4.9.3 + - astunparse==1.6.3 + - async-timeout==4.0.3 + - attrs==23.2.0 + - beautifulsoup4==4.12.3 + - bleach==6.1.0 + - certifi==2024.2.2 + - charset-normalizer==3.1.0 + - cmake==3.29.3 + - contourpy==1.2.1 + - cycler==0.12.1 + - defusedxml==0.7.1 + - fastjsonschema==2.19.1 + - fcd-torch==1.0.7 + - filelock==3.14.0 + - flatbuffers==24.3.25 + - fonttools==4.52.4 + - frozenlist==1.4.1 + - fsspec==2024.5.0 + - gast==0.5.4 + - google-pasta==0.2.0 + - grpcio==1.64.1 + - h5py==3.11.0 + - huggingface-hub==0.24.6 + - hydra-core==1.3.2 + - imageio==2.26.0 + - importlib-resources==6.4.0 + - joblib==1.2.0 + - jsonschema==4.22.0 + - jsonschema-specifications==2023.12.1 + - jupyterlab-pygments==0.3.0 + - keras==3.3.3 + - kiwisolver==1.4.5 + - libclang==18.1.1 + - lightning-utilities==0.11.2 + - lit==18.1.6 + - markdown==3.6 + - markdown-it-py==3.0.0 + - markupsafe==2.1.5 + - matplotlib==3.7.0 + - mdurl==0.1.2 + - mini-moses==1.0 + - mistune==3.0.2 + - ml-dtypes==0.3.2 + - multidict==6.0.5 + - namex==0.0.8 + - nas-bench-201==2.1 + - nasbench==1.0 + - nbclient==0.10.0 + - nbconvert==7.16.4 + - nbformat==5.10.4 + - networkx==3.0 + - numpy==1.24.2 + - nvidia-cublas-cu11==11.10.3.66 + - nvidia-cublas-cu12==12.1.3.1 + - nvidia-cuda-cupti-cu11==11.7.101 + - nvidia-cuda-cupti-cu12==12.1.105 + - nvidia-cuda-nvrtc-cu11==11.7.99 + - nvidia-cuda-nvrtc-cu12==12.1.105 + - nvidia-cuda-runtime-cu11==11.7.99 + - nvidia-cuda-runtime-cu12==12.1.105 + - nvidia-cudnn-cu11==8.5.0.96 + - nvidia-cudnn-cu12==8.9.2.26 + - nvidia-cufft-cu11==10.9.0.58 + - nvidia-cufft-cu12==11.0.2.54 + - nvidia-curand-cu11==10.2.10.91 + - nvidia-curand-cu12==10.3.2.106 + - nvidia-cusolver-cu11==11.4.0.1 + - nvidia-cusolver-cu12==11.4.5.107 + - nvidia-cusparse-cu11==11.7.4.91 + - nvidia-cusparse-cu12==12.1.0.106 + - nvidia-nccl-cu11==2.14.3 + - nvidia-nccl-cu12==2.20.5 + - nvidia-nvjitlink-cu12==12.5.40 + - nvidia-nvtx-cu11==11.7.91 + - nvidia-nvtx-cu12==12.1.105 + - omegaconf==2.3.0 + - opt-einsum==3.3.0 + - optree==0.11.0 + - pandas==1.5.3 + - pandocfilters==1.5.1 + - pillow==10.3.0 + - protobuf==3.20.3 + - pyparsing==3.1.2 + - python-dateutil==2.9.0.post0 + - pytorch-lightning==2.0.1 + - pytz==2024.1 + - pyyaml==6.0.1 + - rdkit==2023.9.4 + - referencing==0.35.1 + - requests==2.32.2 + - rich==13.7.1 + - rpds-py==0.18.1 + - safetensors==0.4.5 + - scikit-learn==1.2.1 + - scipy==1.13.1 + - seaborn==0.13.2 + - simplejson==3.19.2 + - soupsieve==2.5 + - tensorboard==2.16.2 + - tensorboard-data-server==0.7.2 + - tensorflow==2.16.1 + - tensorflow-io-gcs-filesystem==0.37.0 + - termcolor==2.4.0 + - threadpoolctl==3.5.0 + - tinycss2==1.3.0 + - torch==2.0.0 + - torch-geometric==2.3.0 + - torchaudio==2.0.1+rocm5.4.2 + - torchmetrics==0.11.4 + - torchvision==0.15.1 + - tqdm==4.64.1 + - triton==2.0.0 + - typing-extensions==4.12.0 + - tzdata==2024.1 + - urllib3==2.2.1 + - webencodings==0.5.1 + - werkzeug==3.0.3 + - wrapt==1.16.0 + - yacs==0.1.8 + - yarl==1.9.4 + - zipp==3.19.0 +prefix: /home/stud/hanzhang/anaconda3/envs/graphdit