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comment some output statements and record dimension infos

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mhz
2024-07-01 10:05:45 +02:00
parent 7147679c42
commit 4d1dea1179
2 changed files with 20 additions and 7 deletions
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10
graph_dit/diffusion/diffusion_utils.py
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@@ -65,10 +65,11 @@ def reverse_tensor(x):
def sample_discrete_features(probX, probE, node_mask, step=None, add_nose=True):
''' Sample features from multinomial distribution with given probabilities (probX, probE, proby)
:param probX: bs, n, dx_out node features
:param probE: bs, n, n, de_out edge features
:param proby: bs, dy_out global features.
:param probX: bs, n, dx_out node features 1200 8 7
:param probE: bs, n, n, de_out edge features 1200 8 8 2
:param proby: bs, dy_out global features. 1200 8
'''
# print(f"sample_discrete_features in: probX: {probX.shape}, probE: {probE.shape}, node_mask: {node_mask.shape}")
bs, n, _ = probX.shape
# Noise X
@@ -97,8 +98,11 @@ def sample_discrete_features(probX, probE, node_mask, step=None, add_nose=True):
# Sample E
E_t = probE.multinomial(1).reshape(bs, n, n) # (bs, n, n)
# print(f"sample_discrete_features out: X_t: {X_t.shape}, E_t: {E_t.shape}")
E_t = torch.triu(E_t, diagonal=1)
# print(f"sample_discrete_features out: X_t: {X_t.shape}, E_t: {E_t.shape}")
E_t = (E_t + torch.transpose(E_t, 1, 2))
# print(f"sample_discrete_features out: X_t: {X_t.shape}, E_t: {E_t.shape}")
return PlaceHolder(X=X_t, E=E_t, y=torch.zeros(bs, 0).type_as(X_t))

17
graph_dit/diffusion/noise_schedule.py
View File

@@ -103,16 +103,25 @@ class MarginalTransition:
self.e_marginals = e_marginals # Dx, De
self.xe_conditions = xe_conditions
self.u_x = x_marginals.unsqueeze(0).expand(self.X_classes, -1).unsqueeze(0) # 1, Dx, Dx
self.u_e = e_marginals.unsqueeze(0).expand(self.E_classes, -1).unsqueeze(0) # 1, De, De
self.u_xe = xe_conditions.unsqueeze(0) # 1, Dx, De
self.u_ex = ex_conditions.unsqueeze(0) # 1, De, Dx
self.u_x = x_marginals.unsqueeze(0).expand(self.X_classes, -1).unsqueeze(0) # 1, Dx, Dx 1 7 7
self.u_e = e_marginals.unsqueeze(0).expand(self.E_classes, -1).unsqueeze(0) # 1, De, De 1 2 2
self.u_xe = xe_conditions.unsqueeze(0) # 1, Dx, De 1 7 2
self.u_ex = ex_conditions.unsqueeze(0) # 1, De, Dx 1 2 7
self.u = self.get_union_transition(self.u_x, self.u_e, self.u_xe, self.u_ex, n_nodes) # 1, Dx + n*De, Dx + n*De
# print(f"Shape of u_x: {self.u_x.shape}")
# print(f"Shape of u_e: {self.u_e.shape}")
# print(f"Shape of u_xe: {self.u_xe.shape}")
# print(f"Shape of u_ex: {self.u_ex.shape}")
# print(f"Shape of u: {self.u.shape}")
def get_union_transition(self, u_x, u_e, u_xe, u_ex, n_nodes):
# print(f"before processing Shape of u_e: {u_e.shape}")
# print(f"before processing Shape of u_ex: {u_ex.shape}")
u_e = u_e.repeat(1, n_nodes, n_nodes) # (1, n*de, n*de)
u_xe = u_xe.repeat(1, 1, n_nodes) # (1, dx, n*de)
u_ex = u_ex.repeat(1, n_nodes, 1) # (1, n*de, dx)
# print(f"After processing Shape of u_ex: {u_ex.shape}")
# print(f"After processing Shape of u_e: {u_e.shape}")
u0 = torch.cat([u_x, u_xe], dim=2) # (1, dx, dx + n*de)
u1 = torch.cat([u_ex, u_e], dim=2) # (1, n*de, dx + n*de)
u = torch.cat([u0, u1], dim=1) # (1, dx + n*de, dx + n*de)